variant calling format vcf files Search Results


variant call format (vcf) file  (GenomeNext LLC)
90
GenomeNext LLC variant call format (vcf) file
Variant Call Format (Vcf) File, supplied by GenomeNext LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/variant+calling+format+vcf+files/pmc06672030-79-2-8?v=GenomeNext+LLC
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variant call format (vcf) generated from the bam files  (MedGenome)
90
MedGenome variant call format (vcf) generated from the bam files
Variant Call Format (Vcf) Generated From The Bam Files, supplied by MedGenome, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/variant+calling+format+vcf+files/pm37699968-60-19-23?v=MedGenome
Average 90 stars, based on 1 article reviews
variant call format (vcf) generated from the bam files - by Bioz Stars, 2026-07
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variant call (vcf) files  (Gencove Inc)
90
Gencove Inc variant call (vcf) files
Variant Call (Vcf) Files, supplied by Gencove Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/variant+calling+format+vcf+files/pm32436989-23-8-7?v=Gencove+Inc
Average 90 stars, based on 1 article reviews
variant call (vcf) files - by Bioz Stars, 2026-07
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variant call format (vcf) file  (NextGen Sciences)
90
NextGen Sciences variant call format (vcf) file
Variant Call Format (Vcf) File, supplied by NextGen Sciences, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/variant+calling+format+vcf+files/bio_rxiv__2020__05__08__085431-64-4-30?v=NextGen+Sciences
Average 90 stars, based on 1 article reviews
variant call format (vcf) file - by Bioz Stars, 2026-07
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variant call format (vcf) file  (SourceForge net)
90
SourceForge net variant call format (vcf) file
Various circular figures generated by CGDV for genomics and transcriptomics data. a This figure represent amplification (orange dots) and deletion (black dots) from raw output of CNVnator tool. The size of the circles represents relative size of the duplications and deletions at each location. b This figure represents data from a BED file. Each point represents the value per coordinate from a given sample. Black line represents mean value of the data. c This figure represents output of analyzed ChIPSeq data. Heatmap in the inner track represents fold-enrichment value of the peaks. The outer track is a histogram displaying tags with p -value. d This figure represents homologous region in genome from BLAST output in tabular format. e This figure represents gene fusion event result which is the output of STAR-Fusion and/or FusionInspector. The tracks are heatmaps representing Jffpm value (outer track) and Sffpm value (inner track). The links are the position of gene fusion events between chromosomes. f This figure represents data of a <t>Variant</t> <t>Call</t> <t>Format</t> <t>(VCF)</t> file which is output of tools such as GATK ( https://software.broadinstitute.org/gatk/ ) and SAMTools ( http://samtools.sourceforge.net /). Innermost track represents depth of variations and middle track represents SNPs and INDELs in black and red dots respectively. g This figure represents gene/isoform expression FPKM values from Cuffdiff output. Each gene/isoform FPKM values is plotted against various condition as dots. h This figure represents numerical data from a tab limited matrix
Variant Call Format (Vcf) File, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/variant+calling+format+vcf+files/pmc05655900-50-18-37?v=SourceForge+net
Average 90 stars, based on 1 article reviews
variant call format (vcf) file - by Bioz Stars, 2026-07
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variant call file (vcf)  (AgResearch)
90
AgResearch variant call file (vcf)
Various circular figures generated by CGDV for genomics and transcriptomics data. a This figure represent amplification (orange dots) and deletion (black dots) from raw output of CNVnator tool. The size of the circles represents relative size of the duplications and deletions at each location. b This figure represents data from a BED file. Each point represents the value per coordinate from a given sample. Black line represents mean value of the data. c This figure represents output of analyzed ChIPSeq data. Heatmap in the inner track represents fold-enrichment value of the peaks. The outer track is a histogram displaying tags with p -value. d This figure represents homologous region in genome from BLAST output in tabular format. e This figure represents gene fusion event result which is the output of STAR-Fusion and/or FusionInspector. The tracks are heatmaps representing Jffpm value (outer track) and Sffpm value (inner track). The links are the position of gene fusion events between chromosomes. f This figure represents data of a <t>Variant</t> <t>Call</t> <t>Format</t> <t>(VCF)</t> file which is output of tools such as GATK ( https://software.broadinstitute.org/gatk/ ) and SAMTools ( http://samtools.sourceforge.net /). Innermost track represents depth of variations and middle track represents SNPs and INDELs in black and red dots respectively. g This figure represents gene/isoform expression FPKM values from Cuffdiff output. Each gene/isoform FPKM values is plotted against various condition as dots. h This figure represents numerical data from a tab limited matrix
Variant Call File (Vcf), supplied by AgResearch, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/variant+calling+format+vcf+files/pmc07990949-209-3-0?v=AgResearch
Average 90 stars, based on 1 article reviews
variant call file (vcf) - by Bioz Stars, 2026-07
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variant calling output files (*.vcf)  (Broad Institute Inc)
90
Broad Institute Inc variant calling output files (*.vcf)
Various circular figures generated by CGDV for genomics and transcriptomics data. a This figure represent amplification (orange dots) and deletion (black dots) from raw output of CNVnator tool. The size of the circles represents relative size of the duplications and deletions at each location. b This figure represents data from a BED file. Each point represents the value per coordinate from a given sample. Black line represents mean value of the data. c This figure represents output of analyzed ChIPSeq data. Heatmap in the inner track represents fold-enrichment value of the peaks. The outer track is a histogram displaying tags with p -value. d This figure represents homologous region in genome from BLAST output in tabular format. e This figure represents gene fusion event result which is the output of STAR-Fusion and/or FusionInspector. The tracks are heatmaps representing Jffpm value (outer track) and Sffpm value (inner track). The links are the position of gene fusion events between chromosomes. f This figure represents data of a <t>Variant</t> <t>Call</t> <t>Format</t> <t>(VCF)</t> file which is output of tools such as GATK ( https://software.broadinstitute.org/gatk/ ) and SAMTools ( http://samtools.sourceforge.net /). Innermost track represents depth of variations and middle track represents SNPs and INDELs in black and red dots respectively. g This figure represents gene/isoform expression FPKM values from Cuffdiff output. Each gene/isoform FPKM values is plotted against various condition as dots. h This figure represents numerical data from a tab limited matrix
Variant Calling Output Files (*.Vcf), supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/variant+calling+format+vcf+files/pm28498987-73-13-7?v=Broad+Institute+Inc
Average 90 stars, based on 1 article reviews
variant calling output files (*.vcf) - by Bioz Stars, 2026-07
90/100 stars
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variant call file (vcf)  (Fabric Genomics)
90
Fabric Genomics variant call file (vcf)
Various circular figures generated by CGDV for genomics and transcriptomics data. a This figure represent amplification (orange dots) and deletion (black dots) from raw output of CNVnator tool. The size of the circles represents relative size of the duplications and deletions at each location. b This figure represents data from a BED file. Each point represents the value per coordinate from a given sample. Black line represents mean value of the data. c This figure represents output of analyzed ChIPSeq data. Heatmap in the inner track represents fold-enrichment value of the peaks. The outer track is a histogram displaying tags with p -value. d This figure represents homologous region in genome from BLAST output in tabular format. e This figure represents gene fusion event result which is the output of STAR-Fusion and/or FusionInspector. The tracks are heatmaps representing Jffpm value (outer track) and Sffpm value (inner track). The links are the position of gene fusion events between chromosomes. f This figure represents data of a <t>Variant</t> <t>Call</t> <t>Format</t> <t>(VCF)</t> file which is output of tools such as GATK ( https://software.broadinstitute.org/gatk/ ) and SAMTools ( http://samtools.sourceforge.net /). Innermost track represents depth of variations and middle track represents SNPs and INDELs in black and red dots respectively. g This figure represents gene/isoform expression FPKM values from Cuffdiff output. Each gene/isoform FPKM values is plotted against various condition as dots. h This figure represents numerical data from a tab limited matrix
Variant Call File (Vcf), supplied by Fabric Genomics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/variant+calling+format+vcf+files/pm36007526-82-22-18?v=Fabric+Genomics
Average 90 stars, based on 1 article reviews
variant call file (vcf) - by Bioz Stars, 2026-07
90/100 stars
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variant call format (vcf) files incorporating snv and cnv calls  (Fabric Genomics)
90
Fabric Genomics variant call format (vcf) files incorporating snv and cnv calls
Various circular figures generated by CGDV for genomics and transcriptomics data. a This figure represent amplification (orange dots) and deletion (black dots) from raw output of CNVnator tool. The size of the circles represents relative size of the duplications and deletions at each location. b This figure represents data from a BED file. Each point represents the value per coordinate from a given sample. Black line represents mean value of the data. c This figure represents output of analyzed ChIPSeq data. Heatmap in the inner track represents fold-enrichment value of the peaks. The outer track is a histogram displaying tags with p -value. d This figure represents homologous region in genome from BLAST output in tabular format. e This figure represents gene fusion event result which is the output of STAR-Fusion and/or FusionInspector. The tracks are heatmaps representing Jffpm value (outer track) and Sffpm value (inner track). The links are the position of gene fusion events between chromosomes. f This figure represents data of a <t>Variant</t> <t>Call</t> <t>Format</t> <t>(VCF)</t> file which is output of tools such as GATK ( https://software.broadinstitute.org/gatk/ ) and SAMTools ( http://samtools.sourceforge.net /). Innermost track represents depth of variations and middle track represents SNPs and INDELs in black and red dots respectively. g This figure represents gene/isoform expression FPKM values from Cuffdiff output. Each gene/isoform FPKM values is plotted against various condition as dots. h This figure represents numerical data from a tab limited matrix
Variant Call Format (Vcf) Files Incorporating Snv And Cnv Calls, supplied by Fabric Genomics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/variant+calling+format+vcf+files/pmc08208046-105-6-19?v=Fabric+Genomics
Average 90 stars, based on 1 article reviews
variant call format (vcf) files incorporating snv and cnv calls - by Bioz Stars, 2026-07
90/100 stars
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variant call format (vcf) 4.1  (Floragenex)
90
Floragenex variant call format (vcf) 4.1
Various circular figures generated by CGDV for genomics and transcriptomics data. a This figure represent amplification (orange dots) and deletion (black dots) from raw output of CNVnator tool. The size of the circles represents relative size of the duplications and deletions at each location. b This figure represents data from a BED file. Each point represents the value per coordinate from a given sample. Black line represents mean value of the data. c This figure represents output of analyzed ChIPSeq data. Heatmap in the inner track represents fold-enrichment value of the peaks. The outer track is a histogram displaying tags with p -value. d This figure represents homologous region in genome from BLAST output in tabular format. e This figure represents gene fusion event result which is the output of STAR-Fusion and/or FusionInspector. The tracks are heatmaps representing Jffpm value (outer track) and Sffpm value (inner track). The links are the position of gene fusion events between chromosomes. f This figure represents data of a <t>Variant</t> <t>Call</t> <t>Format</t> <t>(VCF)</t> file which is output of tools such as GATK ( https://software.broadinstitute.org/gatk/ ) and SAMTools ( http://samtools.sourceforge.net /). Innermost track represents depth of variations and middle track represents SNPs and INDELs in black and red dots respectively. g This figure represents gene/isoform expression FPKM values from Cuffdiff output. Each gene/isoform FPKM values is plotted against various condition as dots. h This figure represents numerical data from a tab limited matrix
Variant Call Format (Vcf) 4.1, supplied by Floragenex, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/variant+calling+format+vcf+files/pmc05131513-101-8-13?v=Floragenex
Average 90 stars, based on 1 article reviews
variant call format (vcf) 4.1 - by Bioz Stars, 2026-07
90/100 stars
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variant called format (vcf) files  (Snpsaurus LLC)
90
Snpsaurus LLC variant called format (vcf) files
Various circular figures generated by CGDV for genomics and transcriptomics data. a This figure represent amplification (orange dots) and deletion (black dots) from raw output of CNVnator tool. The size of the circles represents relative size of the duplications and deletions at each location. b This figure represents data from a BED file. Each point represents the value per coordinate from a given sample. Black line represents mean value of the data. c This figure represents output of analyzed ChIPSeq data. Heatmap in the inner track represents fold-enrichment value of the peaks. The outer track is a histogram displaying tags with p -value. d This figure represents homologous region in genome from BLAST output in tabular format. e This figure represents gene fusion event result which is the output of STAR-Fusion and/or FusionInspector. The tracks are heatmaps representing Jffpm value (outer track) and Sffpm value (inner track). The links are the position of gene fusion events between chromosomes. f This figure represents data of a <t>Variant</t> <t>Call</t> <t>Format</t> <t>(VCF)</t> file which is output of tools such as GATK ( https://software.broadinstitute.org/gatk/ ) and SAMTools ( http://samtools.sourceforge.net /). Innermost track represents depth of variations and middle track represents SNPs and INDELs in black and red dots respectively. g This figure represents gene/isoform expression FPKM values from Cuffdiff output. Each gene/isoform FPKM values is plotted against various condition as dots. h This figure represents numerical data from a tab limited matrix
Variant Called Format (Vcf) Files, supplied by Snpsaurus LLC, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/variant+calling+format+vcf+files/pm31338917-149-0-8?v=Snpsaurus+LLC
Average 90 stars, based on 1 article reviews
variant called format (vcf) files - by Bioz Stars, 2026-07
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variant call format vcf files  (Biotechnology Information)
86
Biotechnology Information variant call format vcf files
Various circular figures generated by CGDV for genomics and transcriptomics data. a This figure represent amplification (orange dots) and deletion (black dots) from raw output of CNVnator tool. The size of the circles represents relative size of the duplications and deletions at each location. b This figure represents data from a BED file. Each point represents the value per coordinate from a given sample. Black line represents mean value of the data. c This figure represents output of analyzed ChIPSeq data. Heatmap in the inner track represents fold-enrichment value of the peaks. The outer track is a histogram displaying tags with p -value. d This figure represents homologous region in genome from BLAST output in tabular format. e This figure represents gene fusion event result which is the output of STAR-Fusion and/or FusionInspector. The tracks are heatmaps representing Jffpm value (outer track) and Sffpm value (inner track). The links are the position of gene fusion events between chromosomes. f This figure represents data of a <t>Variant</t> <t>Call</t> <t>Format</t> <t>(VCF)</t> file which is output of tools such as GATK ( https://software.broadinstitute.org/gatk/ ) and SAMTools ( http://samtools.sourceforge.net /). Innermost track represents depth of variations and middle track represents SNPs and INDELs in black and red dots respectively. g This figure represents gene/isoform expression FPKM values from Cuffdiff output. Each gene/isoform FPKM values is plotted against various condition as dots. h This figure represents numerical data from a tab limited matrix
Variant Call Format Vcf Files, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/variant+calling+format+vcf+files/pmc12548466-72-0-11?v=Biotechnology+Information
Average 86 stars, based on 1 article reviews
variant call format vcf files - by Bioz Stars, 2026-07
86/100 stars
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Image Search Results


Various circular figures generated by CGDV for genomics and transcriptomics data. a This figure represent amplification (orange dots) and deletion (black dots) from raw output of CNVnator tool. The size of the circles represents relative size of the duplications and deletions at each location. b This figure represents data from a BED file. Each point represents the value per coordinate from a given sample. Black line represents mean value of the data. c This figure represents output of analyzed ChIPSeq data. Heatmap in the inner track represents fold-enrichment value of the peaks. The outer track is a histogram displaying tags with p -value. d This figure represents homologous region in genome from BLAST output in tabular format. e This figure represents gene fusion event result which is the output of STAR-Fusion and/or FusionInspector. The tracks are heatmaps representing Jffpm value (outer track) and Sffpm value (inner track). The links are the position of gene fusion events between chromosomes. f This figure represents data of a Variant Call Format (VCF) file which is output of tools such as GATK ( https://software.broadinstitute.org/gatk/ ) and SAMTools ( http://samtools.sourceforge.net /). Innermost track represents depth of variations and middle track represents SNPs and INDELs in black and red dots respectively. g This figure represents gene/isoform expression FPKM values from Cuffdiff output. Each gene/isoform FPKM values is plotted against various condition as dots. h This figure represents numerical data from a tab limited matrix

Journal: BMC Genomics

Article Title: CGDV: a webtool for circular visualization of genomics and transcriptomics data

doi: 10.1186/s12864-017-4169-5

Figure Lengend Snippet: Various circular figures generated by CGDV for genomics and transcriptomics data. a This figure represent amplification (orange dots) and deletion (black dots) from raw output of CNVnator tool. The size of the circles represents relative size of the duplications and deletions at each location. b This figure represents data from a BED file. Each point represents the value per coordinate from a given sample. Black line represents mean value of the data. c This figure represents output of analyzed ChIPSeq data. Heatmap in the inner track represents fold-enrichment value of the peaks. The outer track is a histogram displaying tags with p -value. d This figure represents homologous region in genome from BLAST output in tabular format. e This figure represents gene fusion event result which is the output of STAR-Fusion and/or FusionInspector. The tracks are heatmaps representing Jffpm value (outer track) and Sffpm value (inner track). The links are the position of gene fusion events between chromosomes. f This figure represents data of a Variant Call Format (VCF) file which is output of tools such as GATK ( https://software.broadinstitute.org/gatk/ ) and SAMTools ( http://samtools.sourceforge.net /). Innermost track represents depth of variations and middle track represents SNPs and INDELs in black and red dots respectively. g This figure represents gene/isoform expression FPKM values from Cuffdiff output. Each gene/isoform FPKM values is plotted against various condition as dots. h This figure represents numerical data from a tab limited matrix

Article Snippet: The links are the position of gene fusion events between chromosomes. f This figure represents data of a Variant Call Format (VCF) file which is output of tools such as GATK ( https://software.broadinstitute.org/gatk/ ) and SAMTools ( http://samtools.sourceforge.net /).

Techniques: Generated, Amplification, Variant Assay, Software, Expressing